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sqlsurvey log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2014-04-23-02-18/RF_PKG_CHECK/PKGS/sqlsurvey.Rcheck'
* using R version 3.1.0 Patched (2014-04-20 r65427)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'sqlsurvey/DESCRIPTION' ... OK
* this is package 'sqlsurvey' version '0.6-11'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Thomas Lumley '
New submission
* checking package namespace information ... OK
* checking package dependencies ... NOTE
  No repository set, so cyclic dependency check skipped
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'sqlsurvey' can be installed ... WARNING
Found the following significant warnings:
  Warning: R:/run/building/build_2014-04-23-02-18/RF_PKG_CHECK/PKGS/sqlsurvey.Rcheck/00_pkg_src/sqlsurvey/man/sqlsurvey.Rd:32: unknown macro '\connection'
See 'R:/run/building/build_2014-04-23-02-18/RF_PKG_CHECK/PKGS/sqlsurvey.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  'DBI' 'KernSmooth' 'MonetDB.R'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  'isCreatedVariable'
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
sqlvar: no visible binding for global variable '_fpc_'
sqlvar: no visible binding for global variable '_n_'
* checking Rd files ... WARNING
prepare_Rd: sqlhexbin.Rd:45-47: Dropping empty section \examples
prepare_Rd: sqlsurvey.Rd:32: unknown macro '\connection'
prepare_Rd: sqlvar.Rd:27-29: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file '/sqlrepsurvey.Rd':
  \usage lines wider than 90 characters:
     sqlrepsurvey(weights, repweights, scale, rscales, driver=MonetDB.R(), database, table.name, key = "row_names", mse = FALSE, check.facto ... [TRUNCATED]
  \examples lines wider than 100 characters:
     svytotal(~I(agep %in% 55:59)+I(agep %in% 60:64)+I(agep %in% 65:74)+I(agep %in% 75:84)+I(agep>84),alabama)

Rd file '/sqlsurvey.Rd':
  \examples lines wider than 100 characters:
     sqhanes<-sqlsurvey(id="sdmvpsu",strata="sdmvstra",weights="fouryearwt",key="seqn",database="monetdb://localhost/ACS",driver=MonetDB(),t ... [TRUNCATED]
     svyplot(bpxsar~bpxdar, design=sqhanes, style="subsample",col=ifelse(riagendr==1,"blue","magenta"),pch=19)

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... WARNING
Unknown package 'RMonetDB' in Rd xrefs
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Codoc mismatches from documentation object 'svyquantile.sqlsurvey':
svyquantile.sqlsurvey
  Code: function(x, design, quantiles, build.index = FALSE, na.rm =
                 TRUE, ...)
  Docs: function(x, design, quantiles, build.index = FALSE, ...)
  Argument names in code not in docs:
    na.rm
  Mismatches in argument names:
    Position: 5 Code: na.rm Docs: ...
svyquantile.sqlrepsurvey
  Code: function(x, design, quantiles, se = FALSE, na.rm = TRUE, ...)
  Docs: function(x, design, quantiles, se = FALSE, ...)
  Argument names in code not in docs:
    na.rm
  Mismatches in argument names:
    Position: 5 Code: na.rm Docs: ...

Codoc mismatches from documentation object 'update.sqlsurvey':
update.sqlsurvey
  Code: function(object, ..., MAX.LEVELS = 100)
  Docs: function(object, ...)
  Argument names in code not in docs:
    MAX.LEVELS
update.sqlrepsurvey
  Code: function(object, ..., MAX.LEVELS = 100)
  Docs: function(object, ...)
  Argument names in code not in docs:
    MAX.LEVELS

* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

WARNING: There were 4 warnings.
NOTE: There were 5 notes.
See
  'R:/run/building/build_2014-04-23-02-18/RF_PKG_CHECK/PKGS/sqlsurvey.Rcheck/00check.log'
for details.

Run time: 48.67 seconds.