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blme log file (check_x86_64_windows)
* using log directory 'R:/run/building/build_2016-03-10-10-00/RF_PKG_CHECK/PKGS/blme.Rcheck'
* using R version 3.2.4 RC (2016-03-07 r70284)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'blme/DESCRIPTION' ... OK
* this is package 'blme' version '1.0-3'
* checking CRAN incoming feasibility ... WARNING
Maintainer: 'Vincent Dorie '
Insufficient package version (submitted: 1.0.3, existing: 1.0.4)
The Date field is not in ISO 8601 yyyy-mm-dd format.
* checking package namespace information ... OK
* checking package dependencies ... NOTE
No repository set, so cyclic dependency check skipped
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'blme' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'doRUnit.R' [11s]
Warning message:
running command '"R:/lib/R/R-PATC~1/bin/x64/R" CMD BATCH --vanilla "doRUnit.R" "doRUnit.Rout"' had status 1
ERROR
Running the tests in 'tests/doRUnit.R' failed.
Last 13 lines of output:
blme unit testing - 8 test functions, 2 errors, 1 failure
ERROR in test.blme.parsePrior.cov.prior.exceptions: Error in checkWarning(parsePrior(blmerFit, "gamma")) :
object '.testLogger' not found
ERROR in test.blme.bglmer: Error in mkGlmerDevfun(fr, X, reTrms, family, nAGQ, verbose, control, :
(list) object cannot be coerced to type 'integer'
FAILURE in test.blme.blmer.covarPrior: Error in checkEquals(fit@pp$theta, 0.626025390625) :
Mean relative difference: 5.858368e-06
Error:
unit testing failed (#test failures: 1, #R errors: 2)
Execution halted
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR, 1 WARNING, 1 NOTE
See
'R:/run/building/build_2016-03-10-10-00/RF_PKG_CHECK/PKGS/blme.Rcheck/00check.log'
for details.
Run time: 92.32 seconds.