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needleman.wunsch log file (build_win64)
Fri Sep 27 14:47:22 2013: Building binary for package needleman.wunsch (SVN revision 16)
using R version 3.0.2 RC (2013-09-24 r63985) ...
* installing to library 'R:/lib/local/3.0'
* installing *source* package 'needleman.wunsch' ...
** libs
*** arch - i386
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw.cpp -o nw.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw_sat_quer.cpp -o nw_sat_quer.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw_sg.cpp -o nw_sg.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw_sg_mult.cpp -o nw_sg_mult.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws.cpp -o nws.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws_sat_quer.cpp -o nws_sat_quer.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws_sg.cpp -o nws_sg.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws_sg_mult.cpp -o nws_sg_mult.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw.cpp -o qnw.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw_sat_quer.cpp -o qnw_sat_quer.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw_sg.cpp -o qnw_sg.o
g++ -m32 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw_sg_mult.cpp -o qnw_sg_mult.o
g++ -m32 -shared -s -static-libgcc -o needleman.wunsch.dll tmp.def nw.o nw_sat_quer.o nw_sg.o nw_sg_mult.o nws.o nws_sat_quer.o nws_sg.o nws_sg_mult.o qnw.o qnw_sat_quer.o qnw_sg.o qnw_sg_mult.o R:/lib/local/3.0/Rcpp/lib/i386/libRcpp.a -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/i386 -lR
installing to R:/lib/local/3.0/needleman.wunsch/libs/i386
*** arch - x64
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw.cpp -o nw.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw_sat_quer.cpp -o nw_sat_quer.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw_sg.cpp -o nw_sg.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nw_sg_mult.cpp -o nw_sg_mult.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws.cpp -o nws.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws_sat_quer.cpp -o nws_sat_quer.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws_sg.cpp -o nws_sg.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c nws_sg_mult.cpp -o nws_sg_mult.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw.cpp -o qnw.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw_sat_quer.cpp -o qnw_sat_quer.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw_sg.cpp -o qnw_sg.o
g++ -m64 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"R:/lib/local/3.0/Rcpp/include" -I"R:/base/local215/include" -O2 -Wall -mtune=core2 -c qnw_sg_mult.cpp -o qnw_sg_mult.o
g++ -m64 -shared -s -static-libgcc -o needleman.wunsch.dll tmp.def nw.o nw_sat_quer.o nw_sg.o nw_sg_mult.o nws.o nws_sat_quer.o nws_sg.o nws_sg_mult.o qnw.o qnw_sat_quer.o qnw_sg.o qnw_sg_mult.o R:/lib/local/3.0/Rcpp/lib/x64/libRcpp.a -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/3.0/needleman.wunsch/libs/x64
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
*** arch - i386
*** arch - x64
* MD5 sums
packaged installation of 'needleman.wunsch' as needleman.wunsch_1.5.zip
* DONE (needleman.wunsch)
Run time: 70.56 seconds.
