R Development Page

CellMix log file (check_x86_64_linux)

Thu Aug 18 13:58:39 2016: Checking package CellMix (SVN revision 10) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/CellMix.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘CellMix/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CellMix’ version ‘1.5.3’
* checking CRAN incoming feasibility ... WARNING
Maintainer: ‘Renaud Gaujoux ’

New submission

FOSS licence with BuildVignettes: false

Found the following (possibly) invalid URLs:
  URL: http://cran.r-project.org/package=CellMix
    From: inst/CITATION
    Status: 404
    Message: Not Found
  URL: http://share.gene.com/clark.iris.2004/iris/iris.html
    From: man/dot-mIRIS.Rd
    Status: 404
    Message: Not Found
  URL: http://share.gene.com/clark.iris.2004/irisSup/Sup6.xls
    From: man/IRIS.Rd
    Status: 404
    Message: Not Found
  URL: http://www.biomedcentral.com/content/supplementary/1471-2164-7-115-S2.xls
    From: man/Palmer.Rd
    Status: 503
    Message: Service Unavailable
  URL: http://www.cs.tut.fi/~erkkila2/software/dsection/DSection.m
    From: man/DSection.Rd
    Status: 404
    Message: Not Found
  URL: http://www.cs.tut.fi/~erkkila2/software/dsection/index.html
    From: man/DSection.Rd
    Status: 404
    Message: Not Found

No package encoding and non-ASCII characters in the following R files:
  R/algorithm-dsection.R
    7: # Timo Erkkil et al.

The Description field should not start with the package name,
  'This package' or similar.

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Depends: includes the non-default packages:
  ‘pkgmaker’ ‘NMF’ ‘csSAM’ ‘registry’ ‘stringr’ ‘GSEABase’ ‘Biobase’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘CellMix’ can be installed ... [11s/13s] ERROR
Installation failed.
See ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/CellMix.Rcheck/00install.out’ for details.
* DONE

Status: 1 ERROR, 1 WARNING, 1 NOTE
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/CellMix.Rcheck/00check.log’
for details.

Run time: 128.12 seconds.