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rImfil log file (check_x86_64_linux)

Sat Sep 21 20:24:46 2013: Checking package rImfil (SVN revision 107) ...
* using log directory ‘/mnt/building/build_2013-09-21-20-03/RF_PKG_CHECK/PKGS/rImfil.Rcheck’
* using R version 3.0.2 RC (2013-09-19 r63958)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘rImfil/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘rImfil’ version ‘0.1-1’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Abhirup Mallik ’
New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘rImfil’ can be installed ... [1s/1s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file found at top level:
  ‘www’
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
bfupdate: no visible binding for global variable ‘z’
manage_explore: no visible binding for global variable
  ‘complete_history’
parallel_armijo: no visible binding for global variable ‘d’
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  ‘armijo_explore’ ‘bfupdate’ ‘bounds’ ‘budget’ ‘collect_stencil_data’
  ‘create_stencil_data’ ‘driver_easy’ ‘f_easy’ ‘f_internal’ ‘f_to_vals’
  ‘imfil_augment_directions’ ‘imfil_core’ ‘imfil_create_scales’
  ‘imfil_create_stencil’ ‘imfil_gauss_newton’ ‘imfil_inner_iteration’
  ‘imfil_optset’ ‘imfil_poll_stencil’ ‘imfil_qn_update’ ‘isok’
  ‘jac_or_grad’ ‘kk_proj’ ‘manage_explore’ ‘manage_stencil_diff’
  ‘many_point_hist_update’ ‘parallel_armijo’ ‘random_augment’
  ‘reconcile_best_point’ ‘scal_complete_history’ ‘scan_history’
  ‘serial_armijo’ ‘setup_explore’ ‘single_point_hist_update’ ‘sr1up’
  ‘stencil_diff’ ‘write_best_to_x’ ‘x0’
All user-level objects in a package should have documentation entries.
See the chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There were 3 notes.
See
  ‘/mnt/building/build_2013-09-21-20-03/RF_PKG_CHECK/PKGS/rImfil.Rcheck/00check.log’
for details.

Run time: 32.09 seconds.