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cpgen log file (00install.out)

* installing *source* package ‘cpgen’ ...
** libs
g++ -std=c++11 -I/srv/R/R-patched/build.15-09-19/include -DNDEBUG  -I/usr/local/include -I"/home/rforge/lib/R/3.2/Rcpp/include" -I"/home/rforge/lib/R/3.2/RcppEigen/include" -I"/home/rforge/lib/R/3.2/RcppProgress/include"  -fopenmp -DNDEBUG  -fpic  -g -O2 -c actools.cpp -o actools.o
g++ -std=c++11 -I/srv/R/R-patched/build.15-09-19/include -DNDEBUG  -I/usr/local/include -I"/home/rforge/lib/R/3.2/Rcpp/include" -I"/home/rforge/lib/R/3.2/RcppEigen/include" -I"/home/rforge/lib/R/3.2/RcppProgress/include"  -fopenmp -DNDEBUG  -fpic  -g -O2 -c cGWAS.cpp -o cGWAS.o
g++ -std=c++11 -I/srv/R/R-patched/build.15-09-19/include -DNDEBUG  -I/usr/local/include -I"/home/rforge/lib/R/3.2/Rcpp/include" -I"/home/rforge/lib/R/3.2/RcppEigen/include" -I"/home/rforge/lib/R/3.2/RcppProgress/include"  -fopenmp -DNDEBUG  -fpic  -g -O2 -c clmm.cpp -o clmm.o
g++ -std=c++11 -shared -L/srv/R/R-patched/build.15-09-19/lib -L/usr/local/lib -o cpgen.so actools.o cGWAS.o clmm.o -fopenmp -L/srv/R/R-patched/build.15-09-19/lib -lR
installing to /mnt/building/build_2015-09-21-12-54/RF_PKG_CHECK/PKGS/cpgen.Rcheck/cpgen/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (cpgen)