R Development Page

BlockR log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2023-06-21-14-24/RF_PKG_CHECK/PKGS/BlockR.Rcheck'
* using R version 4.3.1 Patched (2023-06-19 r84573 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
    gcc.exe (GCC) 10.4.0
    GNU Fortran (GCC) 10.4.0
* running under: Windows 10 x64 (build 19045)
* using session charset: UTF-8
* using option '--as-cran'
* checking for file 'BlockR/DESCRIPTION' ... OK
* this is package 'BlockR' version '0.0.6'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Kevin R. Coombes '

New submission

Size of tarball: 52870220 bytes
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'BlockR' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 47.7Mb
  sub-directories of 1Mb or more:
    data  47.7Mb
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  'blocker' 'n2loglik' 'pivot' 'truncscale'
Undocumented data sets:
  'AMLRPPA' 'giColors' 'giTCGA' 'giType'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
  'AMLRPPA-MSR.rda' 'blocker.Rmd' 'blocker.html' 'blockerGI.Rmd'
  'randomGI.rda' 'randoms.rda' 'scrambGI.rda' 'scrambled.rda'
  'storageGI.rda'
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... NONE
* checking PDF version of manual ... OK
* checking for code which exercises the package ... WARNING
No examples, no tests, no vignettes
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 3 WARNINGs, 2 NOTEs
See
  'R:/run/building/build_2023-06-21-14-24/RF_PKG_CHECK/PKGS/BlockR.Rcheck/00check.log'
for details.


Run time: 59.63 seconds.