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fdnonpar log file (check_x86_64_linux)

Thu Aug 18 14:28:54 2016: Checking package fdnonpar (SVN revision 79) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/fdnonpar.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘fdnonpar/DESCRIPTION’ ... OK
* this is package ‘fdnonpar’ version ‘0.14.2-2’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Ute Hahn ’

New submission

Strong dependencies not in mainstream repositories:
  plutils

Found the following (possibly) invalid URLs:
  URL: http://arxiv.org/abs/1307.0239v2
    From: man/rankEnv.test.Rd
    Status: Error
    Message: libcurl error code 56
    	Recv failure: Connection reset by peer
  URL: http://arxiv.org/abs/1307.0239v3
    From: man/fdnonpar-package.Rd
          man/rankCount.test.Rd
          man/rankEnv.test.Rd
    Status: Error
    Message: libcurl error code 56
    	Recv failure: Connection reset by peer

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘fdnonpar’ can be installed ... [2s/2s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.fdsample plot.funsample plot.urfunction
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
funsample : : no visible binding for global variable ‘x’
legendinfo.urfunction: no visible global function definition for ‘par’
plot.envtest: no visible global function definition for ‘plot’
plot.fdenvelope: no visible binding for global variable ‘plot.default’
plot.fdenvelope: no visible global function definition for ‘par’
plot.fdenvelope: no visible binding for global variable ‘polygon’
plot.fdsample: no visible global function definition for ‘par’
plot.fdsample: no visible binding for global variable ‘matplot’
plot.urfunction: no visible global function definition for ‘dev.cur’
plot.urfunction: no visible global function definition for ‘par’
plot.urfunction: no visible global function definition for
  ‘extendrange’
plot.urfunction: no visible binding for global variable ‘matplot’
plotlegend.funsample: no visible binding for global variable ‘legend’
summaryplot: no visible binding for global variable ‘plot.default’
summaryplot: no visible global function definition for ‘par’
summaryplot: no visible binding for global variable ‘col.env’
summaryplot: no visible binding for global variable ‘alpha.env’
summaryplot: no visible global function definition for ‘plot’
summaryplot: no visible binding for global variable ‘col.smf’
summaryplot: no visible binding for global variable ‘alpha.smf’
summaryplot: no visible binding for global variable ‘lty.smf’
summaryplot: no visible binding for global variable ‘lwd.smf’
tL2.permtest: no visible global function definition for ‘combn’
Undefined global functions or variables:
  alpha.env alpha.smf col.env col.smf combn dev.cur extendrange legend
  lty.smf lwd.smf matplot par plot plot.default polygon x
Consider adding
  importFrom("grDevices", "dev.cur", "extendrange")
  importFrom("graphics", "legend", "matplot", "par", "plot",
             "plot.default", "polygon")
  importFrom("utils", "combn")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  ‘restrict.fdsample’
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [24s/28s] OK
Examples with CPU or elapsed time > 5s
               user system elapsed
DeltaKBronze 16.164  0.008  18.736
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/fdnonpar.Rcheck/00check.log’
for details.


Run time: 75.02 seconds.