Software Map

Tag cloud | Project Tree | Project List


ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

6 projects in result set.
Bayesian Model for Rare Variant analysis - BMRV is an R package that can be readily applied to rare variant (RV) association analysis for various traits (continuous, binary and ordinal), designs (independent, family and twin) and genotype data (sequence and imputated).
Tags: Bayesian, Biostatistics, Genetics, Gibbs sampling, Sequence analysis, genetic interaction, genetics, linear models, mixed effect models
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-12-11 21:50

CNAV - A hidden Markov model approach is used to infer frequencies and haplotype phases of genotypes containing joint allelic and copy-number variation to be used in association studies.
Tags: Markov model, serial tempering, Gibbs sampling, Bayesian, Bioinformatics, Boost, C++, Genetics, bioinformatics, biostatistics, sampling
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-08 14:18

Clustericat - This package performs clustering for categorical data-set by the conditional correlated mixture model. It contains a function clusteringcat() performing the clustering on categorical data-set and returns object of appropriate class.
Tags: Clustering, Gibbs sampling, Multivariate Analysis, clustering, mixture model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-12-05 14:22

CoModes - CoModes focuses on the categorical data clustering. The function CoModescluster performs the model selection and the maximum likelihood estimation. CoModes also contains tools functions.
Tags: Clustering, Gibbs sampling, Mixture, Multivariate Analysis, clustering, data mining, mixture model
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-12-20 08:35

MixCluster - MixCluster performs the cluster analysis of mixed-type data by using a mixture model of Gaussian copulas. Thus, the intra-class dependencies are modelized and the one-dimensional margins of the components follow classical distributions.
Tags: Bayesian, Clustering, Estimation, Gibbs sampling, Machine Learning, Machine learning, Mixture, Multivariate Analysis, PCA, Visualisation, Visualization, clustering, copula, data mining, density estimation, mixed model, mixture, mixture model, mixture modelling, model estimation
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-08-11 14:03

cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
Tags: C++, Genetics, mixed model, openmp, parallel computing, Bioinformatics, Bioinformatics & Biostatistics, Biostatistics, Gibbs sampling, Regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-29 18:34

Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge