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ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

10 projects in result set.
Coalescent for compartmental models - This package provides methods to compute the likelihood of a gene genealogy using coalescent models for populations with complex demographic histories.
Tags: population genetics, epidemiology, infectious disease, Bioinformatics, Ecology, Genetics, Phylogeny
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-01-09 23:07

Evolutionary Biology in R - Active development of this and my other package has been migrated to github http://coleoguy.github.io/software.html
Tags: Bioinformatics, Genetics, Phylogeny, Regression, data mining, education, educational tool, genetics, genomic, phylogeny, population genetics
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-10-11 20:03

Evolutionary models in R - Evolutionary models in R.
Tags: Bioinformatics, Phylogeny, sequence analysis
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-05-08 21:37

Jack-knife in phylogenetic diversity - A package to calculate the taxonomic measures presented in Posadas et al 2001 and in Miranda-Esquivel 2014 (in press)
Tags: Conservation, Phylogeny
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-09-24 05:20

PhyloOrchard - This holds noteworthy chronograms. It serves as the tree store for the DateLife.org project but is available for anyone to use.
Tags: Phylogeny, datasets, phylogeny

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-09-17 01:58

phangorn - phangorn: Phylogenetic analysis in R (Estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, Distance methods & Hadamard conjugation)
Tags: Bioinformatics, Phylogeny
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-10-09 16:14

phylobase - Defining the basic S4 classes and methods for representing and manipulating phylogenetic trees and data in R.
Tags: C++, Phylogeny

Activity Percentile: 0
Activity Ranking: 0
Registered: 2007-12-14 19:17

plantlist: Looking Up Plant Familiers - Looking up APGIII Families and check of Synonyms for plants
Tags: ecology, Phylogeny, phylogenetic diversity, phylogeny, environmetrics, Conservation, Ecological monitoring, Evolution, biodiversity, bioinformatics
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 85
Activity Ranking: 7
Registered: 2015-03-20 06:26

rexpokit - R wrapper for EXPOKIT, a FORTRAN library which allows fast exponentiation of dense and sparse matrices
Tags: matrix manipulation, Phylogeny, multivariate, spatial econometrics, survival
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-06-19 23:30

species delimitation in oysters - The aim of this project is to make clear oyster phylogeny and systematics using both the MrBayes and the BEAST/GMYC analyses based on multigene sequence data.
Tags: Bayesian, Animal, Classification, Sequence analysis, Phylogeny, Tree

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-05-02 12:23

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