Software Map
Tag cloud  Project Tree  Project List
ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R RForge Rcmdr Regression SNP Statistics Time series Visualization Wholegenome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics nonparametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatiotemporal species distribution models survival teaching text mining time series visualization
4 projects in result set.
Parentspecific DNA copy numbers (abo)  Paired PSCBS: Parentspecific copy number in paired tumornormal studies using circular binary segmentation (CBS). Packages in this project: PSCBS.  
Tags: Cancer, Copynumber, DNA, Genetics, QC, SNP, bioinformatics, segmentation  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20091020 01:21 
plumbCNV: [see github: nicholasjcooper]  It has been shown that a comprehensive quality control battery for LogRRatio intensity data is needed to reduce the high false positive rate for rare CNV detection [Shtir et al, 2013]. PlumbCNV is an R package that automates this QC pipeline.  
Tags: CNV, CNP, SNP, QC, plumbCNV, PCA, bigmemory, bigalgebra, plink, penncnv, R, Copy number variant, microarray, illumina, affy  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130207 14:22 
quality management data and functions  Datasets and tools for quality management, with emphasis on the concrete industry  
Tags: QC, robust  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20150113 11:49 
seqTools  Quality control algorithms on fastq files  
Tags: Fastq files, Bioinformatics, Clustering, QC, Secondgeneration Sequencing  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20140422 15:55 