Software Map

Tag cloud | Project Tree | Project List


ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

15 projects in result set.
GenABEL - A suite of packages for statistical genomics
Tags: Bioinformatics, R, meta-analysis, microarray experiment, mixed model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-08-12 17:07

Joint Modeling in R - Joint models for longitudinal and time-to-event (survival) data in R using package JM.
Tags: competing risks models, mixed model, multivariate, survival
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-14 08:19

Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions.
Tags: Bioinformatics, Classification, Clustering, Fuzzy Sets, Graphical model, Machine Learning, Machine learning, Multivariate Analysis, Multivariate Techniques, Whole-genome, classification, clustering, copula, machine learning, mixed model, multivariate statistics, parametric model, mixture model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-05-10 07:45

Meta-Analysis of Diagnostic Accuracy - The mada package (Meta-Analysis of Diagnostic Accuracy) provides model fitting functions for diagnostic accuracy data. This includes the bivariate model of Reitsma et al. (2005) which is equivalent to the HSROC by Rutter&Gatsonis (2001).
Tags: mixed model, meta-analysis, proportional hazards, diagnostic test

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-25 11:07

MixCluster - MixCluster performs the cluster analysis of mixed-type data by using a mixture model of Gaussian copulas. Thus, the intra-class dependencies are modelized and the one-dimensional margins of the components follow classical distributions.
Tags: Bayesian, Clustering, Estimation, Gibbs sampling, Machine Learning, Machine learning, Mixture, Multivariate Analysis, PCA, Visualisation, Visualization, clustering, copula, data mining, density estimation, mixed model, mixture, mixture model, mixture modelling, model estimation
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-08-11 14:03

Multilevel frailty models - Semiparametric proportional hazard models with K random effects, estimated via the EM-PL algorithm (Horny, 2009)
Tags: biostatistics, clustering, dependence, economics, event histories, event sequence, finance, frailty models, longitudinal data, mixed effect models, mixed model, model estimation, multicenter, multivariate, heterogeneity, overdispersion, survival, semiparametric model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-04-30 07:14

Multilocus Random Mixed Linear Model - Multilocus Random Mixed Linear Model for Genome-wide Association Study
Tags: Bioinformatics, Biostatistics, Genetics, MLM, R, SNP, Whole-genome, mixed model, multi-dimensions
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-02-25 14:46

Parametric Frailty Models - Parametric Frailty Models, fitted by maximum marginal likelihood method. Possible basline hazards: Weibull, Exponential, Gompertz, logNormal and loglogistic Possible Frailty distributions: Gamma, Inverse Gaussian and Positive Stable
Tags: survival, frailty models, parametric model, Weibull, Exponential, Gompertz, lognormal, loglogistic, gamma, inverse gaussian, positive stable, clustering, overdispersion, biostatistics, marginal model, marginal likelihood, likelihood, multicenter, heterogeneity, mixed effect models, mixed model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-10-28 16:21

R2MLwiN - R2MLwiN is an R command interface to the MLwiN multilevel modelling software package, allowing users to fit multilevel models using MLwiN from within the R environment.
Tags: R, MLwiN, MCMC, IGLS, Bayesian, mixed model
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 5
Activity Ranking: 40
Registered: 2013-02-10 13:19

R2STATS: A GUI for GLM(M) - R2STATS is a gWidgetsRGtk2 GUI for fitting GLM and GLMM in R. It is intended to make model comparisons easy, for an arbitrary number of models. It also provide automatic plots for all models.
Tags: ANOVA, Bayesian, GUI, Graphical User Interface, educational tool, generalized linear models, lme, mixed effect models, mixed model, model comparison, model estimation, model specification, statistical education

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-07-01 18:40

Tools for longitudinal data analysis - Tools for longitudinal data analysis including general splines with arbitrary varying degree and smoothness, linear hypothesis matrices for splines and other hypotheses for the fixed effects of models with a 'vcov' method.
Tags: mixed model
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-05-21 01:17

afex - Analysis of Factorial Experiments - This project has the goal to provide convenience functions for analyzing factorial experiments, namely provide convenience tools for ANOVA and ANCOVA analyses with type 2 and type 3 sums of squares for classical ANOVA and lmer().
Tags: ANOVA, wrapper, factorial experiment, mixed effect models, mixed model, model estimation, model specification

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-07-26 13:10

cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
Tags: C++, Genetics, mixed model, openmp, parallel computing, Bioinformatics, Bioinformatics & Biostatistics, Biostatistics, Gibbs sampling, Regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-29 18:34

dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology.
Tags: data cloning, likelihood, optimization, Bayesian, ecology, mixed model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-08-17 16:25

flip: Multivariate Permutation Tests - A collection of Univariate and multivariate (i.e. overall and multiplicity control) permutation and rotation tests. dev page at https://github.com/livioivil/flip
Tags: ANOVA, Multiple Comparisons, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, R, R-Forge, biostatistics, bivariate, bivariate analysis, categorical, conditional inference, high dimentional data, missing, missing data, missing values, mixed model, mixture model, mixture modelling, multi, multi-dimensions, multivariate, multivariate regression, multivariate statistics, nonparametric, nonparametric anova, permutation test, permutation tests, statistical inference
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-10-16 19:04

Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge